rs215594774 SNP Detail

Summary

• ID
  rs215594774
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:126389031 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAAGTCAG CTATAAAATG
  CTCCACACAC CCTCCCACGG CACTCAGTTT TGCTGACTAG ACATAATGAC AGCAGCCACA
  ATTAAACAAC AGCGAAGGCG TTACCCCTTC CAATACTGAA AACCATAAGG TGGTCTGTTG
  GAGATTTTTT AAGGGTGAAT CTTCTATTTG CTCATCAACT CACTGCTTTT TAATATTTAC
  Y
  GGGATATGAT TTGCACTGGC AGAAACACAC CACCCTAATT GCTGTAACAT TAATCACTGA
  TGTTTTTACC ATCCATCCGT TCCCAGGGAA CTGAAGTCTT TCCCACCCTT TAGCAGTTGG
  TTTTCACATC ATCTCTGTGA AGTAAGGTGA TCTCGTGAGT CACTGTGGCC AGGGTGGACC
  CTGGAGCATA AGAACCCGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322860919	CHEV_8_128186192	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215594774					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:126389031 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd620e	DNA segment, Chr 8, ERATO Doi 620, expressed	524 bp distal
Gm30871	predicted gene, 30871	within coordinates
Rr180111	regulatory region 180111	170 bp proximal
Rr183380	regulatory region 183380	1464 bp distal
Rr188607	regulatory region 188607	1371 bp proximal