rs215647261 SNP Detail

Summary

• ID
  rs215647261
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:44380657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCCGTGTGT TTTGTTCCCA
  AAGTAAAGTA TGGTTTTAAC CACAGAAAGT AACATTTGAT ATTTCTGAAC CAGTGGGGAA
  CTGAGCCAGT CTAGGTTTTA ACCACTGTAG AACACGCCCA CGGTAATCCT GACTCTGGAG
  GAGGGTGGAC AAGGACATCA GAAGTAGTCA CATAGCTCGA CGGAGTAAGC GGACCACGGG
  S
  GTGTGCGTGC GTGCGCGCGT GCGTGCTTGC GTACTGGAGA GCTGGTCAGG CTGGACGGAG
  GCCCCGTGAC TGGACACAGG CAATTTGGAA CCTTGTTAGA TTATAAGTGA GTTAAGATGA
  AAGAACATTT GGAACCTTGA GAAGAGGTAA AGCGACAATA GGAATAAAAT TTACTAAAAT
  GAAAACCGAC CGAGTTCCCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321100983	CHEV_4_44393529	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215647261					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:44380657 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14212	CpG island 14212	within coordinates
Gm68903	predicted gene, 68903	within coordinates
Rr89080	regulatory region 89080	1144 bp proximal