rs215738826 SNP Detail

Summary

• ID
  rs215738826
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:129955982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTAGGTGG GTGGAAGGGA
  GAGTACCCTG ATAGATACGG GAAGGGGGAT GGAATAGAGG GGTTCCAGAG GGGAAACTGG
  GAAAGGGGAT AACATTTAAA ATGTAAATAT ATAGCATATC AAATAAAGAA ACTATTTAAA
  TCAAATCAGT AATTCTGTAA GATCATTTAT CCATTTAAAT AATATTAATT TATGAAAGTT
  Y
  ATCTTCATAT TGATATCCAG GAAAATTTCC TAATAGAGTG GAAGCAATCA CAGCTCTCTG
  ATCCTTGCTG TTCCAGAGAC AGCTGCATCT TTTCATGCAG TGCCAGCCTC ATCCTATAGA
  AAACAATGGT TAAGGTCTGT GTGAATGGAT TTGGCCTTAT TTGGTGCCAG GGCTGCCTTC
  TGCTCTGCAG TTGGCAAAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323544192	CHEV_10_129557169	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215738826					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:129955982 () rs orientation: forward

Symbol	Name	Function Class
Gm5181	predicted gene 5181	126 bp upstream
Rr385500	regulatory region 385500	1960 bp downstream