rs215749928 SNP Detail

Summary

• ID
  rs215749928
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:184268472 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACATACTT TAATGTCTGA
  CTATATACTC TGTGAAGCAG GGACCGCCCC TTACCCCAGA CACTCCTTGA AGTACAAGCT
  GACTCCATGA GTGGTTAAGG TAGGCTTTGG AAAATATTCT GTTGAATTCA GTCACTGGAA
  ATGCCTTGGT CTGAAGGACA AAGCAGTGTC AGATATGAAT GGTTTAAAAC AGAAATATCA
  W
  AGACCACCAA CATGACAGAA GCCTTGCGCT CAGCTATCAC ATAGCCCTGC CAGCAGAGGC
  TTACTCAACG ACCCACCGTC CATTACTTCT TTTCAACAAG CCACTCTCGT AACATTCTTT
  GAGGTTGTAT GCCCCCACTG AAGTGAATAA TGACATAGTT TATGGTAAAG GGTGAACTGA
  AAAACAGCAG TGTCATTATT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320167606	CHEV_1_186360154	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215749928					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:184268472 () rs orientation: forward

Symbol	Name	Function Class
1700112H15Rik	RIKEN cDNA 1700112H15 gene	within coordinates
Gm70799	predicted gene, 70799	within coordinates
Rr425237	regulatory region 425237	240 bp distal
Rr425238	regulatory region 425238	219 bp proximal
Tssr10585	transcription start site region 10585	492 bp upstream