rs215762570 SNP Detail

Summary

• ID
  rs215762570
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119007829 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCATGACTG TGCAGAGAAC
  ATGAGGACGA AGCTGCGGTC AGGTCACAGT CCCCAGGTGG GCCTCCCCTG CCCTCGACGA
  CTCGGGCTAC ACAAAGTTTC TTCTGCCTGT TATAGATCTT TAGACAGCCC TCAGAGCTAG
  GTTGTCCCTG CATCCCCTGG TACACATCCT ACGCCTCGAT GCGTCTCTTC AGCTCCCGTT
  Y
  ACCCTTCATT TTTTTTTCTA CCCTCTCACC ACTCCTTAGA AAGCTCCTGC CTAAGCAGTG
  CCTCTCATAA GGAGAGGTCA GCACAGGGCA TCTTGCACGG TCTGACGTAG GCTAAGACAA
  GGAACCACTT GTCTTAGAGT GTGTTAATGC TTTGACGGTC AGTTTCCCTT GGCTGTGCTC
  TGGATGGTTT CTTATGAGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323217941	CHEV_9_119087881	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215762570					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119007829 () rs orientation: forward

Symbol	Name	Function Class
Rr193313	regulatory region 193313	229 bp distal
Rr199117	regulatory region 199117	1772 bp proximal
Rr202894	regulatory region 202894	1536 bp proximal
Rr211575	regulatory region 211575	482 bp proximal
Slc22a14	solute carrier family 22 (organic cation transporter), member 14	within coordinates