rs215781311 SNP Detail

Summary

• ID
  rs215781311
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:110231709 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGTGTTA TTATCTCTCT
  TAGTAGATAA GGAAGCTGAA CTTCAGAGAG GTGAAGTAAC TCAGGCAAGG TCACACAGCG
  AGTGGTGGAA CGTGGCTATG CACCCAAGTG CTACAGGCTA TTTTGATGCT ATGAAGACAT
  AGGGAGTAAA ATGAGATAAT TTTAACCTTT AGATTCTCAG GCCAGATGTC TCCACATGTC
  Y
  TCTAACTCTG AGGATGGCGT CAGTAGGTGA TTTGCGCCCC ACGGTGATTC TGAGAGCTTT
  CCATGGGAGC TAGTAGGATG GGGAAGGGGA ACTGCTCTAG CGCTGAGCTC AATAAGCACA
  AAGGAAAGAA ACAAAGTGAG TTGTGAATTC CTGGTCTTCC TTGGAAGCAA GGATCATAAA
  TCAGGAATGG CTTTCCTCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322397548	CHEV_7_117776016	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215781311					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:110231709 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19578	CpG island 19578	1699 bp distal
Gm28863	predicted gene 28863	1605 bp upstream
Rr400547	regulatory region 400547	1994 bp downstream
Rr653272	regulatory region 653272	1790 bp distal
Rr653274	regulatory region 653274	579 bp distal