rs215790585 SNP Detail

Summary

• ID
  rs215790585
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:120754329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAATGCAAT ACCCATCAAA
  TTTCCAACTC AGTTCTTCAA TGAATTAGAA AGAGCAATCT GCAAATTTAT CTGGAATAAC
  AAAAAAACCT AGGATAGCAA AAAGTCTTCT CAAGGATAAA AGAACCTCTG GTGGAATCAC
  CATGCCTGAC CTAAAGCTTT ACTACAGAGA AATTGTGATA AAAACTGCAT GCTACTGGTA
  K
  AGTGACAGAC AAGTAGACCA AATGGAAAAG AATTGAAGAC CCAGAAATGA ACCCACACAC
  CTATGTTCAC TTGATCTTCA ACAAGGAAGG TAAAACCATC CAGTGGAAGA AAGACAGCAT
  TTTCAAAAAA TGGTGCTGGC ACAACTGGTG GTTATCATGT AGGAGAATGC AAATTGATCC
  ATTCCTATCT CCTTGTACTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325960946	CHEV_X_118958241	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215790585					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:120754329 () rs orientation: forward

Symbol	Name	Function Class
Rr395603	regulatory region 395603	1381 bp upstream