rs215805196 SNP Detail

Summary

• ID
  rs215805196
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:122870520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTGGAAG TTTCCTTAGA
  TCCCTCAGGC AGCATGGTAG GAGGACAGAT GTACTCACAG CTAACATGTA TCCCCTGCTC
  TGCAGACATC CGATATGGAC TCCCCTAAGA TTGTACTTCT CAAGGATAGT GGTCCATCTC
  AGTGGGCTTT GTTCTCAGGC AAACAGGGGG CTGAGCATCT TATCCAAGCC ATGTTCCTAG
  Y
  GTAGTTTTGG GGAGTGGGTA CTTCGTATGT AGTCTCTAGA TGGATATGAT AGAGAGGTGG
  TGGCTGGATG TGGCTCTCTG GCAGGTGAGC TGGGTGGATG AATAATTGGT GAATGGGTAG
  GTGTGCGAGC TGATAAGTGG GTAGATGGGT ATATGGTGGA CAGTGAGTTG ACAGACAGGT
  GAGAATAACA GTCACCTGTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322848679	CHEV_8_124667681	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215805196					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:122870520 () rs orientation: forward

Symbol	Name	Function Class
Gm39268	predicted gene, 39268	1981 bp downstream
Gm56875	predicted gene, 56875	within coordinates
Rr174877	regulatory region 174877	120 bp distal
Rr188324	regulatory region 188324	682 bp proximal