rs215813654 SNP Detail

Summary

• ID
  rs215813654
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:44774977 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTCACCGA AAAGGAGAGT
  CTATGTGAGG GATCGGTCTG TGGACATGTC TGGTGTGTAT GTATGTGCCT TGATTGTGTT
  AATACACGAG AGCAGTACCA TTTCCTGGGC TTGGGTCCTA GAATACAAGA GAGGTGTCCT
  AATTAGGATT TGTCTTGCTA CAATGAATCA CCATGACCAA ATAGCAAGTT GGGGAGGAAA
  K
  GATTTAAGGA GCTGACACTT CCAGATCATA TTTCATCTGA AGGAAGCCAG AACAGGGACT
  CAAACAGGGC AGGAACCTGG AGGCAGGAGC TGATGCAGAG GCCATGGAGG GATGCTGCTT
  ACTGGCTTGT TCCCCAGGGC TTTGTTCAAG CTGCTTTCTT ATAGAACCCA GGACCACCAG
  CCCAAGGGTG GCTCCACCCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324330184	CHEV_13_44716870	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215813654					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:44774977 () rs orientation: forward

Symbol	Name	Function Class
Gm40931	predicted gene, 40931	within coordinates
Gm47805	predicted gene, 47805	681 bp upstream
Rr283673	regulatory region 283673	425 bp proximal