rs215882544 SNP Detail

Summary

• ID
  rs215882544
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102285077 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTAAGAATC TCTTAGTACT CCTTAAGCTT
  AGACCTCCAA TATATTCACA GTTGCCTGAA GTCCTGTGTG AACAATGGTC AGGCTCACAG
  AACCACACTT TCTGGGCAAC TTAGGAAAGg tggcacgagc gctgggagcc aagagtgagg
  Y
  tcgaggttga aaggctttcc attttctgac ttgttccttg ggctagtttt tatctcccat
  gcatttcaat ttctcaactt gagaaatgag gataataaat cgcgccaaac ttacaggttg
  ttatgcagct caggtgaaat aTTAACGGTA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320437770	CHEV_2_102294889	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215882544					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102285077 () rs orientation: forward

Symbol	Name	Function Class
Rr561697	regulatory region 561697	894 bp distal
Rr561698	regulatory region 561698	1141 bp distal