rs215939190 SNP Detail

Summary

• ID
  rs215939190
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:100165847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAATGACAT GAATTGTTGC AATCATAGAA
  CAAAATCAAG TTATAAACTG ATCACTAACT GAATAACTTG GTAGGACCAG CAGGCAGGTG
  CCTTGCAGTG AAGAGGGACA ACCTGCCACA GTCTACATGT AGTAACCgaa agacccacaa
  Y
  gtgaggactc ccccacgttc tgactcagga gaggcgccac cccaaaatca ccaacgagaa
  acggtcttgc tgcaaattgc aagaggattt ttattcaaga gcgctctcgg gcccacggtc
  atacaccaca caggggtaga ggaccgtggc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325082826	CHEV_15_100098397	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215939190					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100165847 () rs orientation: forward

Symbol	Name	Function Class
Rr391198	regulatory region 391198	11 bp upstream
Tssr133109	transcription start site region 133109	1217 bp upstream