rs215954269 SNP Detail

Summary

• ID
  rs215954269
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:71245948 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGTA TGGATAGGTA TAAAAGTCCA
  G
  AAGTAAAGGG GAAATGTTAC CAGTA                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321817306	CHEV_6_71218958	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215954269					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:71245948 () rs orientation: forward

Symbol	Name	Function Class
Rr136432	regulatory region 136432	within coordinates
Rr146429	regulatory region 146429	1252 bp proximal
Rr150236	regulatory region 150236	948 bp distal
Rr379579	regulatory region 379579	within coordinates
Rr379580	regulatory region 379580	1757 bp upstream
Tssr56988	transcription start site region 56988	1910 bp upstream
Tssr61348	transcription start site region 61348	1750 bp downstream
Tssr61349	transcription start site region 61349	1767 bp downstream