rs215956953 SNP Detail

Summary

• ID
  rs215956953
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:79491117 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAAACATG GAAAGGATTT
  CCGAGCATCA GCAGCCTGCA TCTGCGTTGT AGCCACCACT CTGTCCAAAG CAGTGTTGTT
  AGAGAAGGAG TAAGGAGCAT AGTTTTAGGG TACAGAAGAT GGCTGCCCCA ACCTGCTTAC
  TCCCCTTCAC CCAACCCCAC ACAGCCTCAG GATCCTGACC AACAAGCTGC CTTGGGAGAC
  R
  AAAGCTTCCA GATGCCATCT AAGCCCTGGC AGGCTTCACG CCAGTGTGAG CCGAGGTGGG
  TCCCGGACAA TTTTCTCTCT TCTGAGCCTC AGTATTCCTG TCCATCCAAG GAACCCTTTC
  ATACCACAAC CCAGTACCCC TAGGAACTGC CTCCCCCTAC AGATGAGCAA TGGAGCTACT
  GAGGTCTCCT GAAGTCTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss372032934	MGP_WTSI_7_86986255	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs215956953					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss372032934	MGP_WTSI_7_86986255	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79491117 () rs orientation: forward

Symbol	Name	Function Class
Anpep	alanyl aminopeptidase, membrane	within coordinates
Gm71751	predicted gene, 71751	1050 bp upstream
Tssr67371	transcription start site region 67371	460 bp upstream
Tssr67372	transcription start site region 67372	648 bp upstream
Tssr67373	transcription start site region 67373	1108 bp upstream
Tssr67374	transcription start site region 67374	1154 bp upstream
Tssr67375	transcription start site region 67375	1188 bp upstream
Tssr73160	transcription start site region 73160	1871 bp upstream
Tssr73161	transcription start site region 73161	452 bp upstream
Tssr73162	transcription start site region 73162	394 bp upstream
Tssr73163	transcription start site region 73163	373 bp upstream
Tssr73164	transcription start site region 73164	210 bp upstream
Tssr73165	transcription start site region 73165	316 bp downstream
Tssr73166	transcription start site region 73166	357 bp downstream
Tssr73167	transcription start site region 73167	565 bp downstream
Tssr73168	transcription start site region 73168	577 bp downstream
Tssr73169	transcription start site region 73169	605 bp downstream
Tssr73170	transcription start site region 73170	636 bp downstream
Tssr73171	transcription start site region 73171	707 bp downstream
Tssr73172	transcription start site region 73172	735 bp downstream
Tssr73173	transcription start site region 73173	751 bp downstream
Tssr73174	transcription start site region 73174	839 bp downstream
Tssr73175	transcription start site region 73175	860 bp downstream
Tssr73176	transcription start site region 73176	918 bp downstream
Tssr73177	transcription start site region 73177	948 bp downstream
Tssr73178	transcription start site region 73178	974 bp downstream
Tssr73179	transcription start site region 73179	1038 bp downstream
Tssr73180	transcription start site region 73180	1105 bp downstream
Tssr73181	transcription start site region 73181	1188 bp downstream
Tssr73182	transcription start site region 73182	1207 bp downstream
Tssr73183	transcription start site region 73183	1246 bp downstream
Tssr73184	transcription start site region 73184	1906 bp downstream