rs215968991 SNP Detail

Summary

• ID
  rs215968991
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:137546347 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTGACACC TTGCTTTGGA
  ATTTGGACAA AAGTTTATAA CCAAGATAAA AATAAGCCAG ACCATGAACA TCTCCACGAA
  CTTCGTCTCT TTCTGCTCCT AGAAGCCTTG TGCGCTGCTG GAGGGTCATG TGAGCAAAGC
  CTGGAGTGCC AACCTTCTTC ATGGCAGGCA CTTTACAGGA AAATCAACAC ACATGAGAAT
  R
  CTGTTCAACA GCATCACCCA GGCCACGCGG GCATGACCCA GTGGATAAAG GGCTTACCAA
  AGCAAGTATG AAGACCTAAC ATCCCTGTAA AAAGCCAGAG GCAGCAGTGA GCATCCATGA
  CTCCAGGGCT GAAGAGGCAG AGACACAGGA ATCTCTAGAG CAGACTAGCT AGCCAGCCTA
  GAAGAATCCA TGCATCCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss370242433	MGP_WTSI_6_137517870	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs215968991					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss370242433	MGP_WTSI_6_137517870	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:137546347 () rs orientation: forward

Symbol	Name	Function Class
Eps8	epidermal growth factor receptor pathway substrate 8	within coordinates
Rr640222	regulatory region 640222	1115 bp distal
Rr640223	regulatory region 640223	within coordinates
Rr640224	regulatory region 640224	874 bp proximal
Rr640225	regulatory region 640225	1658 bp proximal
Rr640226	regulatory region 640226	1976 bp proximal
Tssr63894	transcription start site region 63894	1397 bp downstream
Tssr63895	transcription start site region 63895	1436 bp downstream
Tssr63896	transcription start site region 63896	1463 bp downstream
Tssr63897	transcription start site region 63897	1658 bp downstream
Tssr63898	transcription start site region 63898	1689 bp downstream