rs215970300 SNP Detail

Summary

• ID
  rs215970300
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97147630 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTGGAGG GACACACTCA
  AATCGTATTC AAACCATAGC ACCCGCTCTC CACTATAAGG AAAATTCTGT GAAGACAGCC
  GTTTCCTCTG TCAGGGTCCC AGCTGACATT TGGTTGGCAT TCAGTGACGT TTTCATGAAT
  GAAACCGAGT GACAGGATAC GTATTCTAGA TGGCAATGGT CTCAGTCTGC TGGTTCTTGT
  Y
  GCTTACACTT CATAAAGCTT GTCTTGAAGG CAGGGGACCC TGACAAATGT TAGAGTCCTG
  GATCCAGCCA TGCCTGAAAG CCACCAAATG CTTTTATTTA ACTGTATTCT CTACTGATCT
  TTGTTTTGGG TACACTGTTC TGCGTTGTGC CTTTGTCCCT TGTGACTGAC CTAGTCCTGG
  TGCCCTCAGT GGAGGTGTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325076414	CHEV_15_97080180	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215970300					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97147630 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7616	CpG island 7616	1690 bp distal
Gm57814	predicted gene, 57814	587 bp upstream
Pced1b	PC-esterase domain containing 1B	within coordinates
Rr305670	regulatory region 305670	230 bp distal
Rr308785	regulatory region 308785	within coordinates
Rr308786	regulatory region 308786	1771 bp proximal
Rr312356	regulatory region 312356	829 bp distal