rs215984888 SNP Detail

Summary

• ID
  rs215984888
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:151336045 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tttttgttt tttttgtttt tgtttttGTA
  GAGGTGGGGG Gtttcaagac agggtttctc tgtgtaaccc tggctgtcct ggaactcact
  ctgtagacca gggtggcctc gaactcagaa attcgcctgc ctctgcctcc caagtgctgg
  R
  atcaaaggcg tgggccacca ctgcacagct GCCAATTTTC AAGTTTAGCT ATGTGTTTCC
  AAACTTGGCC TTAAAACTAC AAGATGATTT AAAAATGTGC ATCTCACTAG TTTTAGAGCA
  TGTTTTGAGA ATCTGAGTAT CTATCATTAG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320056666	CHEV_1_153307424	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs215984888					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151336045 () rs orientation: forward

Symbol	Name	Function Class
Rr372239	regulatory region 372239	within coordinates
Rr420294	regulatory region 420294	1152 bp proximal