rs216052681 SNP Detail

Summary

• ID
  rs216052681
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97023240 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCAATGGA AAGTCTTTAT
  TAGCCAACCA GTGATTACAC TGGATGTTCA GGATTCCAGT GTAGCCCCAA GCCTTTCTCA
  GGGTGAGCTT TTAAGCACAT AAACTATGTC CTGGGTTGAC ATACTTCAGT TAACAAGAAT
  AGTTAGCCAG ATGCAGAACT ATGGAAGCCA GAAGGCAAGG TTAGTACATT TAGAGGCTTT
  S
  CCAGGACTAT GGACTTTGAT GGATTAAGTC TTTGTTTTAG TTCTAGCCTG TGGTGTTTTC
  TACATTCCCA GTTTTATGGC CTGAATGGTA CTTATTGATA GATGATTTCT CCTCGGGTGA
  AATGGGCCAA TTCAAGACAG ATTAGATTAT ATCAAAGGCA GGTTTATTGG GAATCTGCTC
  TCAGGTGAGT TCACTGGCCC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323116078	CHEV_9_97041606	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216052681					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97023240 () rs orientation: forward

Symbol	Name	Function Class
Gm57041	predicted gene, 57041	within coordinates
Rr685156	regulatory region 685156	226 bp distal
Tssr86631	transcription start site region 86631	48 bp downstream