rs216068978 SNP Detail

Summary

• ID
  rs216068978
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:24244256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAGGCACAC GTATGCACAA
  CTGAAACAGA CACTTGAAGG AATCCCATAC TATGTTCATA CTTCTTTAAA AAAAATGCTT
  TTTAAGATAG GTCTCAGTCG CTACTATGTA GCACAGGCTA CAACTCAAAT TCACAGTAAC
  TCTTCCACAA GTCACTACAG CCAGCCTGTT TATCCCTCAT GGTCCACACC ATGTGTGGGG
  M
  ACTGGGGACT GAACTTGAAC TTTGCACATG ATAGGAACAC ACACTACCAC TCAATGGCAC
  CCCAGCCTGC TTCTGAGTTT TCATTTTAAA GACTGGGTCT CATTAAGTTG TCTCAGCCTT
  GAACTTACTC TGTCTTCTGG GCGAACTCAG CCATGTTCAC ACCTTTCCCT GCTTGATCAT
  AAATTCTTCT CATAGACCTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324294203	CHEV_13_24152142	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216068978					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:24244256 () rs orientation: forward

Symbol	Name	Function Class
4933427I18Rik	RIKEN cDNA 4933427I18 gene	within coordinates
Carmil1	capping protein regulator and myosin 1 linker 1	within coordinates
Tssr121764	transcription start site region 121764	960 bp upstream
Tssr121765	transcription start site region 121765	949 bp upstream