rs216128677 SNP Detail

Summary

• ID
  rs216128677
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107181819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATAGCCCAC CAATACTGTA
  CCTAAGTGAG TCTATCAGAG TCTATGCAGG AGTCAAGGCA AAGGAAACAG CACCAAGACA
  GCATGTAATA TCTGGAGTTC TGGCCCGGTA CCTCCTTCCA CTCCTTAGTG GGATATGTGG
  ACTTTCACAT TCTCTGTTGC GCCTACCCGC AACTCTCCTT TCTCAGAGCT TGTTTGCAGG
  R
  AGGGGAGAAA CAAAAGAAAC TGAAGTTAAA GACTTCATAG TCTTTATATA AATCTCGCTC
  CACAAAGGAT GCCATCTAAA CTCTCCTCTA GAAAGGAGAT CATGGGGGTG GGGGAAATAG
  GTTTAAAGGA AGGGCTAGAG GTATGTGATA GAAATAGGAG ACTTAAGAAG AGACATTGGA
  CTAGTGAGGG TAGAAGAGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320865157	CHEV_3_107077421	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216128677					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107181819 () rs orientation: forward

Symbol	Name	Function Class
Rr582951	regulatory region 582951	243 bp distal
Rr582952	regulatory region 582952	459 bp distal
Rr582953	regulatory region 582953	1703 bp proximal