rs216181748 SNP Detail

Summary

• ID
  rs216181748
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:158256792 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    accataaaa gcctggctac ctgagtttga
  tcccaggaac tcacctaaaa gtggaaggat tgtcctctga ccactataca tgtaccattg
  cacacATCCC CTCTTCATGA ACACACATAT AGAAATAATA AAAGAGTGAA TCAGTAACAA
  Y
  CTAATTCCGA AGTAGAGTGG AAAGGTATAA TGTTACTTAG AAGTTTTTCT ATGCAGGATT
  ACATAAGATC ATCTTCATGC AAGTATATAA TGTTTTTTGA GCATATATCC CTCAGTGTAA
  CATTTGAGTG GAGACCTACC TATATGAAGT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325989247	CHEV_X_155911728	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216181748					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:158256792 () rs orientation: forward

Symbol	Name	Function Class
Map7d2	MAP7 domain containing 2	within coordinates
Tssr162488	transcription start site region 162488	942 bp downstream
Tssr162489	transcription start site region 162489	915 bp downstream