rs216192965 SNP Detail

Summary

• ID
  rs216192965
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110847411 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CACCCCTAA ACATACACGT ATAAATAATT
  CCAAATTAAT ATATCATTAA AATGGCtttt atttttttga cagggtttct ctgtgtaacc
  ctgactgtcc tggaactcac tctgtagacc aggctggcct ggaactcaga aatctgcctg
  Y
  ctctgtctcc caagtgctgg gattaaaggc atgcgccacc accgcccggc tCATAATATC
  ATAATATGAC TCTTAAGACA TTCATTAAAA AGAAGTTCTC ATTTCTATAC CACACATGTA
  CACACACACA CACAATCTCT CTCTCTcaca                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323195408	CHEV_9_110920847	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216192965					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110847411 () rs orientation: forward

Symbol	Name	Function Class
Ltf	lactotransferrin	949 bp upstream
Rr687278	regulatory region 687278	689 bp proximal
Tssr87456	transcription start site region 87456	941 bp upstream
Tssr91676	transcription start site region 91676	1176 bp upstream