rs216198685 SNP Detail

Summary

• ID
  rs216198685
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116513605 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGACTTCC TTGGTGATGA
  ACAGCAGTGT GGAATTATAA GCTGAATAAA CCCTTTCCTC CCCAACTTGC TTCTTGGTCA
  TGATGTTTGT GCAGGAATAG AAACCCTGAC TAAGACCCCC CACCTGAATA AAAGAATTCC
  AAATTACCTC AATCGTACAT TAAAAAGATT TTATTCAGTG ATCAGATTAG GAACATTCAG
  Y
  GTTGCAAATA AGTATAATCA TAGATTTAAA AAAATCATAT GATCAATAAG CAGGAAGTGA
  ATAGATGTTT GCTGATAGAG GAAGGTAAGT CCTGAGGCAA GAGTCCTCTC GATTTATATG
  TGTGACTTGG ATGTGACTGA ACTACATGAC TTCTAATTCC TTTGTCAACT CTAAAAAGAG
  ATGTGTATGA CCAGCCTTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323490229	CHEV_10_116114756	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216198685					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116513605 () rs orientation: forward

Symbol	Name	Function Class
Gm26579	predicted gene, 26579	within coordinates
Rr385348	regulatory region 385348	953 bp upstream