rs216221899 SNP Detail

Summary

• ID
  rs216221899
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:20968947 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tctactaag tgagttccag gacacccagg
  gctatacaga gaaaccctgt ctcaaaaaaa caaaaaacaa acaaaaacaa aaacaaacaa
  acaaacaaaa aAGGACTGTT TTCAATACAA GACCTCCACC CAGCCAATCT TCACAGTAGA
  S
  CTGGTCTCTA CCACTAAGGC ATGCTGGACA GTGCCACTTT TACCTTGGAG ATGACAGGAG
  ACCCATGCTT CAAGTATCAG GGAATGACTC CCAGTTCAAA GGACATTTCT ACACTGCCAC
  CACTGCAGCA CCCAAATGAA CCCCTACTCC                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323929999	CHEV_12_20924807	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216221899					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:20968947 () rs orientation: forward

Symbol	Name	Function Class
3110053B16Rik	RIKEN cDNA 3110053B16 gene	within coordinates
Cpgi4472	CpG island 4472	1820 bp proximal
Rr463638	regulatory region 463638	1209 bp proximal