rs216281587 SNP Detail

Summary

• ID
  rs216281587
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:4691739 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACCACTAC CTGATGGTGC
  TACCTGACCT GTTGGGCAGG CTTCTAGAAC ACTGGGCATC ACACTGTATA TAGGACGGCT
  CTTACTGTAA GGACATTACA TGCCCAGATG TTAACAGTGC TAAGGATAAA AGGTCCCTTC
  TGCCTTCATG TGTGTAACCA CTTGAGACCA CCAGGCCCAA CTCTCAGGAG CCTCCTCAAA
  Y
  AGGTAGGCTC AATGGCGGCC TCAGTTCCAG CATGTTAGAT ATCTCAAGGG TACTTCTTAA
  AACTTCAATG TCAGCCAGGT GGTGGCGCAC ACCTTTAATC TTAGCACTTG GGAGGCAGAG
  GCAGGTGAAT CTCTGGGTTT GAGGTCAGCC TGGTCTAGAG TGAGTCCCAG GACAGCCAGG
  GCTACACAGA GACCTTGTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325089584	CHEV_16_4873875	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216281587					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:4691739 () rs orientation: forward

Symbol	Name	Function Class
Rr510946	regulatory region 510946	1609 bp distal
Rr510947	regulatory region 510947	71 bp proximal
Tssr139803	transcription start site region 139803	1860 bp downstream
Tssr139804	transcription start site region 139804	1953 bp downstream
Ubald1	UBA-like domain containing 1	903 bp downstream