rs216291619 SNP Detail

Summary

• ID
  rs216291619
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:99141018 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAGCATGA ATCTTTATAT
  GAATTATGTG AGTTTAATCC ATATTTGCTT GTATAAAAGT TTTTCCTTCT GTGAGTGTGA
  TTCTCTTCTC CTGGTTCAAT ACAAGTTTAT TGCTCCAAAC TTCCCCCTAG CCTGACAAGC
  TAAAGGCATC TGGACAAGAG GGAGAAGGCT CTAGCAGCTA ATCCTTTACT TAGTACCCTG
  Y
  TGTTTCCTGA TGAGGTGTTA AATGCCAGAC TTGCAGTTTC TGACCTTAAA AGGACTCAGG
  CAGGTCAGCT ACAGTAGCTA AGTGACTTAG ACAGGTAAAC GTTTTATTAC ACAGCAACCC
  TAAATACCTC CTAAGATCAA GTCTTAATCC CCCAATGCCC TTCCCCCTCC GCTGCCTGGA
  GAAAGCAGAA GAACAGTTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323135176	CHEV_9_99159384	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216291619					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:99141018 () rs orientation: forward

Symbol	Name	Function Class
Cep70	centrosomal protein 70	within coordinates
Gm18914	predicted gene, 18914	1980 bp downstream
Gm47199	predicted gene, 47199	510 bp downstream
Rr383815	regulatory region 383815	1215 bp downstream
Rr685374	regulatory region 685374	1651 bp distal