rs216305524 SNP Detail

Summary

• ID
  rs216305524
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:57953973 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCAG AGCCAGAGCT GCCAGAAACA
  T
  GCCCTGCGAC GCAGGAGGAG GAGTC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321136094	CHEV_4_57966845	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216305524					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:57953973 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14335	CpG island 14335	1543 bp proximal
Gm57068	predicted gene, 57068	1211 bp upstream
Rr592846	regulatory region 592846	796 bp distal
Rr592847	regulatory region 592847	within coordinates
Rr592848	regulatory region 592848	226 bp proximal
Rr592849	regulatory region 592849	1792 bp proximal
Tssr41865	transcription start site region 41865	440 bp upstream
Txn1	thioredoxin 1	Intron