rs216326390 SNP Detail

Summary

• ID
  rs216326390
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132235568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCAAAGTGA CTTTCTTTTT CTTGTttttg
  tttttcgaga cagggtttct ctgtgtagcc ctggctgtcc tggaactcac tttgtagacc
  aggctggcct cgaactcaga aatccacctg cctctgcctc ccaagtgctg ggattaaaag
  Y
  gtgtgccacc accgAGCAGA ACAAAGTGAC TTTCTTAAAT CCAATGtgta atcctaacag
  gcaggaggct gaggcaggaa gatagtcata aggtcaaggc cagcctgaac tacagagtga
  gaccctgtct caaagaggat gggccttcct                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321333898	CHEV_4_132064172	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216326390					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132235568 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14964	CpG island 14964	1195 bp proximal
Gm12981	predicted gene 12981	within coordinates
Rr377205	regulatory region 377205	254 bp downstream
Rr377206	regulatory region 377206	613 bp upstream
Rr600989	regulatory region 600989	572 bp distal
Rr600990	regulatory region 600990	947 bp proximal
Rr600991	regulatory region 600991	1382 bp proximal
Sesn2	sestrin 2	within coordinates