rs216361123 SNP Detail

Summary

• ID
  rs216361123
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32748101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCAATCCC AGAGTAAGCG
  GAGTTTCACC CAGAGCCATC AGAGGGCGCT GCAGGACAAC AGAGGCTGTC TGGAAGCTTG
  GCTGAGAAGA GACTGGGGCT GCTGTCTGAG TCCAAGGGCC TTTCTGGGTA GCCCACAGGG
  CCTGCAGACT GATGAGAGTT CCATGCACCC CAGCTCAAGA ACGGCCTTTA TTCTTTTGGC
  R
  ATAAGGAGGC ACTATAGATG TTTGAGCAGG AGAAATGCAA CGTTTACTGG CCGATTTGGG
  GCAGTTTTCT TTTTTCTTTT TTTTTTTCTT TTTTTTTTTT TTTTTTTGAG ACAGGGTCTC
  AGCTTTTAGT GGATATAGCA GGCTGGCCTT TAACTTGTAG CAAATCTCTG TCCTAACCAC
  CAGAGCGGTG CAATTAGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325362244	CHEV_17_32666072	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216361123					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32748101 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8980	CpG island 8980	207 bp distal
Cyp4f17	cytochrome P450, family 4, subfamily f, polypeptide 17	within coordinates
Rr405183	regulatory region 405183	54 bp downstream
Rr525770	regulatory region 525770	148 bp distal