rs216376905 SNP Detail

Summary

• ID
  rs216376905
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:105909371 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTTCCATAG TTTTCCTAAT TATGTAAATC
  GTGTGGCACA TGGGAGTAGT TTTCCACTCA ATACCAGTTC TGGCACTTCA GTATACATTG
  AAGTCTCATT TCCCCCTCCC CCAAATTGta tatatatata tatatatata tatatTTAAA
  W
  GTTATAAAGA TTACAAAGTC TGAAAAGTCA TTTTTCAGAA AAATCTAGTA AGTGAGCTTC
  TGAGGTTGGG CTGAACCTGA AAGTTTTTTT GTGTTTGATA GAGAGGAATA AGACTGATGA
  ATTTCATGAA AATTTCTCAG GTTTAAAGTT                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320448470	CHEV_2_105919183	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216376905					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:105909371 () rs orientation: forward

Symbol	Name	Function Class
Dcdc5	doublecortin domain containing 5	within coordinates
Gm74997	predicted gene, 74997	within coordinates
Gm75005	predicted gene, 75005	within coordinates
Tssr19274	transcription start site region 19274	1899 bp upstream
Tssr19275	transcription start site region 19275	1967 bp upstream