rs216388417 SNP Detail

Summary

• ID
  rs216388417
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180696955 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctctccagt cctggcttgc actttgtaat
  gccagatacc gaagagtcaa ggaaggattg cttgatccct taagtttgga ggccagcctt
  agcaaaatga caagacacta tctcaagaca GTTCCCCCAA ACCCCCTCCA AATGTCAGGT
  K
  CAGCCCTTTA GATTTTATAG AATTCTATTT GTGAGATGAA AGGTTCTTTG AGCTTCTGGC
  AGGTCAGCTG GACAGCCATG CCTGAAGAAT TTCTGTTGTC ACAGCAAGTG GCTGAACCTA
  ATGGCCAGGT TAGCAGAGCT GTGCCCTGTC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320160138	CHEV_1_182799521	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216388417					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180696955 () rs orientation: forward

Symbol	Name	Function Class
Gm71256	predicted gene, 71256	within coordinates
Rr424611	regulatory region 424611	942 bp proximal
Sde2	SDE2 telomere maintenance homolog (S. pombe)	1277 bp downstream