rs216400373 SNP Detail

Summary

• ID
  rs216400373
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110839481 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ttcccttct ttttcctctc tctttctgtc
  ctctttcttt ccctgcctcc actcccttcc ccacagccca taacctaaat aaacttcatt
  ttgtactaga cctgtcccat ggctgatact cctgggggat gggatgcctc agcatgggcc
  Y
  gccaaggcga ccccctccca ccacatcCTG CTGCTGCATT CCAAAACGAA TCAGTTACCT
  CAGTTAACTT TGGTGTTAAT TGTTGACATT TGGGGCAtgt cctagtttca ttcatgttat
  ggtaaaatat cctgacaaca acttggggga                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323195385	CHEV_9_110912917	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216400373					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110839481 () rs orientation: forward

Symbol	Name	Function Class
Rr202613	regulatory region 202613	1754 bp proximal
Rr207420	regulatory region 207420	920 bp proximal
Tssr87455	transcription start site region 87455	1284 bp downstream