rs216406223 SNP Detail

Summary

• ID
  rs216406223
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180550111 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGGA GGGAGGGAGG GAGGGAGGGA
  R
  GGAGGGAATG AATTCCAAGT GTGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320160035	CHEV_1_182652677	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216406223					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180550111 () rs orientation: forward

Symbol	Name	Function Class
Gm8101	predicted gene 8101	455 bp downstream
Gm70653	predicted gene, 70653	896 bp downstream
Rr424550	regulatory region 424550	1803 bp distal
Rr424552	regulatory region 424552	within coordinates