rs216536437 SNP Detail

Summary

• ID
  rs216536437
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:78004402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTACCCAAA AGGACCTTCA
  TCACATTTTC TGAAATCATA TCTGCAGTGT TGTCCTGAAG TCTCACTAAT CCTAGGAAAT
  AACATTTCAT GAATTTTTAA TTCTTTTAAA ATTTTCAATT GTTACTTTAG CGTTTCTATT
  ACCATTTCAA TTATATAACA AACTGCCCCA ATACTGAGAC TCCCATCCTC CCCCCCCCCC
  A
  CACACACACA CCCCAAAACC CCAGCCATTT TTTCCCATAG CTTTGGGAGG TTGAGACTCA
  TGGGAAGCTC ATAGGACAGC TTGTCACATC TTGACTGGCA TAGCCGGGGT AGCAGAGCCT
  GGAGGATCTG ATTCAGCCGG GACTTCTTCA GTCACTCTGG TGTCATTTTC TCTTTACATG
  GTTTCTGTGT GTTTGAAGTT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BALB/cJ	BUB/BnJ	C3H/HeJ	C57BL/6J	DBA/1J	DBA/2J	I/LnJ	KK/HlJ	LEWES/EiJ	MA/MyJ	NZB/BlNJ	NZO/HlLtJ	RF/J	RIIIS/J	SEA/GnJ	ST/bJ	SWR/J	WSB/EiJ
ss350199774	MGP_WTSI_1_78024340	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BALB/cJ	BUB/BnJ	C3H/HeJ	C57BL/6J	DBA/1J	DBA/2J	I/LnJ	KK/HlJ	LEWES/EiJ	MA/MyJ	NZB/BlNJ	NZO/HlLtJ	RF/J	RIIIS/J	SEA/GnJ	ST/bJ	SWR/J	WSB/EiJ
rs216536437					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss350199774	MGP_WTSI_1_78024340	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:78004402 () rs orientation: forward

Symbol	Name	Function Class
Gm70314	predicted gene, 70314	within coordinates