rs216554632 SNP Detail

Summary

• ID
  rs216554632
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185994832 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAGCATCCC TCAAAATTTT TTTTATCACA
  CTCTCACATT ACATGCCTGC TCTACTGCTG TGCAACAACA TATTATGTGA ACATCATATA
  AACTACTTAC TTGTATGTGA Aatatatata catatataca tatatatata tatatatata
  Y
  acacacatat gtaGTGTCTG AAGTAGAAAA GAAAAGAAAG CAACTTTCAA AACTATATGC
  TAATTATGAC AAAACATTTA ACCTCACAAT TCTCTGGTAT GTTTGAGAAA AGAAATGATA
  AAATGAAACA ACCACTTGAA CTTTTAAACC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320182588	CHEV_1_188086514	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216554632					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185994832 () rs orientation: forward

Symbol	Name	Function Class
D1Mit361	DNA segment, Chr 1, Massachusetts Institute of Technology 361	636 bp distal
D1Mit361.3	DNA segment, Chr 1, Massachusetts Institute of Technology 361.3	508 bp distal
Rr372597	regulatory region 372597	430 bp downstream
Rr425468	regulatory region 425468	652 bp distal
Rr425469	regulatory region 425469	1352 bp proximal
Rr425470	regulatory region 425470	1906 bp proximal