rs216578746 SNP Detail

Summary

• ID
  rs216578746
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:63882556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTT AATATACTTC ACAGAAGCTA
  A
  AGTCATTTGT GAAGAGGAGC TCTTA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323707824	CHEV_11_63805232	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216578746					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:63882556 () rs orientation: forward

Symbol	Name	Function Class
Cox10	heme A:farnesyltransferase cytochrome c oxidase assembly factor 10	within coordinates
D11Mit339	DNA Segment, Chr 11, Massachusetts Institute of Technology 339	1207 bp proximal
Gm57391	predicted gene, 57391	1656 bp downstream
Rr449103	regulatory region 449103	1814 bp distal
Rr449104	regulatory region 449104	198 bp proximal
Tssr102112	transcription start site region 102112	1987 bp downstream
Tssr102113	transcription start site region 102113	1958 bp downstream
Tssr102114	transcription start site region 102114	1929 bp downstream
Tssr102115	transcription start site region 102115	1847 bp downstream