rs216584535 SNP Detail

Summary

• ID
  rs216584535
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:72429556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTCGAGTG ACCTGTTAAA
  ACAGCAGTTT TCAACCTGTC GGTCACGACC CCTCTGGGGT CGCATATCAG ATATCCTGAA
  TATTAGATAT GCACATTACA GTTCATAACA GTAGCAAGAT TACAGTTGTG AAATAAGAAG
  AAAATAACTT TATGGTTGGG GGTCACCACA ACACAAGGAA CTGTATTAAA GGGTCATAGC
  R
  TTAGGAAGAC TGAGAGCCAG TGTGTTAGAA TCTGAGAACG GGGTCTCAGC ATTCCATTAT
  CAGCCCATAG CTTAACATGG TGGGATATGC CTGTAATCAC AGCACTTAGG AGACTGATAC
  AGGAGGATAT GGAGTTTGAG GCTAGCCTGA GCTATGTAGT GAGACTTCAA ACCCGATAAA
  ACAAAATAAA ACAAGACACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320343252	CHEV_2_72437269	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216584535					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:72429556 () rs orientation: forward

Symbol	Name	Function Class
Rr558998	regulatory region 558998	840 bp distal
Rr558999	regulatory region 558999	1517 bp proximal
Tssr18356	transcription start site region 18356	1664 bp downstream