rs216623704 SNP Detail

Summary

• ID
  rs216623704
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110846779 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTGCTCCAG AAATATGTTC CTTATTGCCA
  GTGATTTAAG CTCTGTCCAT GTCTGCCTCT GAAGAAAACA CAGATTGCAA TCACAAGAGA
  AGGTTCCAGT GGCCGGCCTG AGGCTCCCTC AGGCTAACAC CTCACTACTT CATGTGTAAA
  M
  TCTTGAGCTA AGTTTACATC TTGTACCGAT ACGGTTACCA TATTCTCTCT GCAGGCCCAA
  ACTGCCCCAC TGTATGTATG GGCACCACAC TTGAGGTGAT TACCACAGCT CCACCCCCGC
  CCCCGCAAAT AACACATTTA TTGCTTCCGG                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323195402	CHEV_9_110920215	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216623704					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110846779 () rs orientation: forward

Symbol	Name	Function Class
Ltf	lactotransferrin	1581 bp upstream
Rr687278	regulatory region 687278	1321 bp proximal
Tssr87456	transcription start site region 87456	1573 bp upstream
Tssr91676	transcription start site region 91676	544 bp upstream