rs216633711 SNP Detail

Summary

• ID
  rs216633711
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118094889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAAAGCCT TGATACTTTT
  TGATGTTTAT TGTCCCCAAA TCATAATGAT GCCTTCAGAT TTTTTTTAAA GTGAAAGGAG
  TTAGTAGGAA CATTGTCATG TGACTTTCAC TTATTGTCTG GGAATGTCAA GTGGAGCTTG
  CCAGACGGTG GAGATGATGA TAATCAACTT GTACACTGCA CACACATGTG CTTATCCCCC
  A
  ACACACATGT CCACACACAC ACATATGCAC ATACATGCAC ACACACATGT GCTTATCCCC
  CCGACACACA TGTCCACACA CACATGCACA CACACATGTG CTTATCCCCC CGACACACAT
  GCACACACAC ATGTGCTTAT CCCCCCAACA CACATGTACA CACACACACA CACAAAACAC
  AAAGATTAGT AGAGCAAGCT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C3H/HeH	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	JF1/MsJ	KK/HlJ	LG/J	QSi5/Ianm
ss355406008	MGP_WTSI_2_118090144	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C3H/HeH	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	JF1/MsJ	KK/HlJ	LG/J	QSi5/Ianm
rs216633711					SNP	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss355406008	MGP_WTSI_2_118090144	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118094889 () rs orientation: forward

Symbol	Name	Function Class
Gm29232	predicted gene 29232	within coordinates
Gm75384	predicted gene, 75384	within coordinates
Rr397203	regulatory region 397203	839 bp downstream
Rr563206	regulatory region 563206	767 bp distal
Rr563207	regulatory region 563207	1070 bp distal
Rr563208	regulatory region 563208	286 bp distal
Rr563209	regulatory region 563209	559 bp distal