rs216646969 SNP Detail

Summary

• ID
  rs216646969
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:56533218 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTGGAGTT TGTTCCTGCA
  GAGTACTCCT AAGTCAACGT GAATAAGCCT GTTCAGTGTC TCTAGGCATT AACCTTGTAC
  AGAGTACGTA AAATATTTTG TCAAAGTAAG AACTTCACTG GACAAGAAAA GTCAATTAAA
  TACAGTTTTT AAGCTAAAAA AAAAAAAAAA AAAAAAAAAA CAAAAATGCT GGATCCTGTT
  Y
  GCATATCTAG TCTGTTAGCT TATGTCTTTT TATTGGGGAA TTGAGTCCAT TGATGTTGAG
  CAATATTAAA GACAAACGAT TGTTAGTTGC TGTTATGTTT GTTGTATGAG GTGGAAGTGT
  GTGTGTGTGT GTGTCTGTGT GATTCTCTCT TTTTGTCTTT GTTGTAAGAT AATTTTTGCT
  TTGATGAAAA TAGTCTCCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323314503	CHEV_10_56376928	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216646969					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:56533218 () rs orientation: forward

Symbol	Name	Function Class
Gm9795	predicted pseudogene 9795	236 bp downstream
Gm66844	predicted gene, 66844	21 bp upstream
Tssr93379	transcription start site region 93379	1184 bp downstream