rs216687565 SNP Detail

Summary

• ID
  rs216687565
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:39007691 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCTACTTT TATTTCTTTC
  TTGTCTTTAC CTGCTGCAGC AGGACCGGAA GGAATACATT GATAAGACTG GAGACAGTAT
  ATTGCCCTGA TTCTTCCTTA GTTTATATAT ATATATATAT ATTTAAGTAT TTGAGAATTA
  CATACAAGAC TTTTCCTTTT GCATCATTTC CAGCCTTCCT TGTCTACATG ACAATTCCTC
  Y
  TATATTCTTC CACTTTCTCT AAAATTCATG ATTTTTAAAA AATACTTGTG GACAAAAGCA
  CATGGTCTTC AGAAGAGCAA TTATTGGAGC CTCTGAAACC ATAGGGTGTT CACATCTTTT
  CTTCCTTGTG CTCTTCATTA TTTCCTTAAT CCTCTTTTTC CTATCTAATC ATTCTTGACA
  ATTTTTTTTT CCTATTTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322911092	CHEV_9_38903980	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216687565					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:39007691 () rs orientation: forward

Symbol	Name	Function Class
Gm47085	predicted gene, 47085	572 bp upstream