rs216696697 SNP Detail

Summary

• ID
  rs216696697
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110838141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGCTACAGA GAAGAGGCGA CCTGGGGAGA
  AGAAGGGGCT AGAGAGAGGA AAAAGGAAGA TGGACAGGTA GAGAGCTCTT TGATTGCTAG
  TTTTCTTTAC AAACAGGAAA GCATTGCCAA CAATATTATT GGGTCAGAGC TATTGCTTTC
  Y
  TGGTCTCTCT CACCCTCAAC ACCTTCAACT TCTCCAACAC CTGCACCAAC ATATGCTATG
  GCATACGCTG CTGGAGGAGC CAGCTCTCTT CAGAAGAGGC CATCTGGGTG GCAAAGCTTT
  GAGTCCTTTC TAATATTGTT TGGAAGTTAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323195382	CHEV_9_110911577	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216696697					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110838141 () rs orientation: forward

Symbol	Name	Function Class
1700061E17Rik	RIKEN cDNA 1700061E17 gene	1001 bp downstream
Gm10030	predicted gene 10030	1044 bp downstream
Tssr87455	transcription start site region 87455	48 bp upstream