rs216742920 SNP Detail

Summary

• ID
  rs216742920
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:67599381 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAACTAAAC TTACTGACAG ATCCAGTAAT ATCCACGTGA
  GAGTGACCCA GCTAATGCTT CCACCAGAAA GCTGGAAAGT GTACGCCCAG AATCACCATG
  M
  CCAGGCAAAG ACCTTCACCC AGCCAACACT GCCCAGGCAA TCCTTGAACT TACAAGCTTC
  TCCATTCCTT GATTTCTGTC AGTCTAACGC AGGGGTCAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324392139	CHEV_13_67552198	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216742920					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:67599381 () rs orientation: forward

Symbol	Name	Function Class
Gm38307	predicted gene, 38307	396 bp upstream
Rr388629	regulatory region 388629	within coordinates
Tssr120253	transcription start site region 120253	3 bp downstream
Tssr123102	transcription start site region 123102	329 bp downstream
Zfp874a	zinc finger protein 874a	within coordinates