rs216744901 SNP Detail

Summary

• ID
  rs216744901
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:83107385 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCACCAGA ACACAAGTCA GCTGGATTCT TATTCCTAAA
  ATCCACTGCC TTCAGAATTG TAAAAAACAA ACTCTCCCTG TTTAAACCAC TCAGTCTCTA
  K
  AACTCTGTTA CGATACCCAC AGCTGACTCA TACAAATTAT AACACATCCC CACCAGCCAG
  GAAACACCAG CCAGGAAAAT TGATTTTCCC TTAAATATG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322735887	CHEV_8_84904655	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216744901					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:83107385 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Il15	interleukin 15			Intron
				Noncoding-Transcript-Variant
Tssr81957	transcription start site region 81957			1691 bp upstream
Tssr81958	transcription start site region 81958			1675 bp upstream
Tssr81959	transcription start site region 81959			660 bp upstream
Tssr81960	transcription start site region 81960			473 bp upstream
Tssr81961	transcription start site region 81961			435 bp upstream