TAACCTCAGA GGAAACTGAC ATTCCTTCTG GAAGTAGAAT ATAGTGATAA CCTCTGATAA GTCCCTAACG CTATTGCTTC CTCTCTGCTG CTGGCCAAAA GCACCTTAGG GGAAGACAGG TTTCATTTGG ATTACAGTTC CAGGTCACAC AGTCCATCAC TGAGGGGAGT CATAGTAGGA AGTGTTCCTA CTCGAACCAT S CATGATCATT GCCTGCCTCT GTGGCTTCTT CACAGGCTCA TGCTTGCTTT AGATAGTTTT CTCAGACAGC TCAAGACCAC TTGCCTAGGG ATGGCACCGC CCACAGTGGG CAGACCTCAA AACAAATGTC TATAGACCAG CTTGATAAAG ACTCCATGAC ATTTTTGATT GTTTGTTTGT TTGAATTTCA GGTGATTCTA S = C/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss325357670 | CHEV_17_31013646 | CHEVERUD | SCREENING_POP | f | SNP | G | C |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs216810401 | SNP | G | C |
Location: Chr17:31095675 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi8937 | CpG island 8937 | 1989 bp distal | ||||||
Dnah8 | dynein, axonemal, heavy chain 8 | 939 bp downstream | ||||||
Gm9937 | predicted gene 9937 | 1417 bp upstream | ||||||
Gm50252 | predicted gene, 50252 | within coordinates | ||||||
Rr330583 | regulatory region 330583 | 1875 bp distal | ||||||
Rr334765 | regulatory region 334765 | 1726 bp proximal | ||||||
Rr337287 | regulatory region 337287 | 865 bp proximal | ||||||
Rr341200 | regulatory region 341200 | 1675 bp distal | ||||||
Tssr147267 | transcription start site region 147267 | 1665 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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