rs216810401 SNP Detail

Summary

• ID
  rs216810401
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31095675 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAACCTCAGA GGAAACTGAC
  ATTCCTTCTG GAAGTAGAAT ATAGTGATAA CCTCTGATAA GTCCCTAACG CTATTGCTTC
  CTCTCTGCTG CTGGCCAAAA GCACCTTAGG GGAAGACAGG TTTCATTTGG ATTACAGTTC
  CAGGTCACAC AGTCCATCAC TGAGGGGAGT CATAGTAGGA AGTGTTCCTA CTCGAACCAT
  S
  CATGATCATT GCCTGCCTCT GTGGCTTCTT CACAGGCTCA TGCTTGCTTT AGATAGTTTT
  CTCAGACAGC TCAAGACCAC TTGCCTAGGG ATGGCACCGC CCACAGTGGG CAGACCTCAA
  AACAAATGTC TATAGACCAG CTTGATAAAG ACTCCATGAC ATTTTTGATT GTTTGTTTGT
  TTGAATTTCA GGTGATTCTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325357670	CHEV_17_31013646	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216810401					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31095675 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8937	CpG island 8937	1989 bp distal
Dnah8	dynein, axonemal, heavy chain 8	939 bp downstream
Gm9937	predicted gene 9937	1417 bp upstream
Gm50252	predicted gene, 50252	within coordinates
Rr330583	regulatory region 330583	1875 bp distal
Rr334765	regulatory region 334765	1726 bp proximal
Rr337287	regulatory region 337287	865 bp proximal
Rr341200	regulatory region 341200	1675 bp distal
Tssr147267	transcription start site region 147267	1665 bp upstream