rs216825014 SNP Detail

Summary

• ID
  rs216825014
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119232654 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGGCTTAGG GCAGTTCCAG
  GAAACGTGGA CAGTCGGGCA TTAAGACTCC AGAGAAAAGA TCGTGGAGAT TAGGACGGCT
  GGTGCCCGGT GGCTGGGGCT CTGGGTCCTG CGCGTCTTTG TTCCCAACCC CCATTACACA
  TGCAGCTCGG GTCCCCTGCG GCCCGAGGTG GCAGCAGCGC GGAGTCTGGG AAACCCGCGA
  S
  GGGCGGGGCC CGGAGTGTAG GGAAGGGCTG GGATCCCCCT TGCAGCTGCG GGGGTGGGTA
  TCCCAGATGG TCATTGCACC CCCTCACAGG GATCCTCACT TTCAATCTTT TCTATTACAA
  GGTAGTGAGG GTTAGCTGTT AATTCCGACC CCGAGAGTTT TTGCACGAGC CTGGGTGCGG
  TGGAGCATGA GTGTACGAAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323219424	CHEV_9_119312706	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216825014					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119232654 () rs orientation: forward

Symbol	Name	Function Class
Acvr2b	activin receptor IIB	within coordinates
Cpgi22474	CpG island 22474	within coordinates
Gm47320	predicted gene, 47320	1520 bp downstream
Gm53515	predicted gene, 53515	1690 bp upstream
Rr688481	regulatory region 688481	1134 bp distal
Rr688482	regulatory region 688482	1604 bp distal
Rr688483	regulatory region 688483	within coordinates
Rr688484	regulatory region 688484	1047 bp distal
Rr688485	regulatory region 688485	887 bp distal
Tssr87682	transcription start site region 87682	1435 bp downstream
Tssr87683	transcription start site region 87683	1363 bp downstream
Tssr87684	transcription start site region 87684	1319 bp downstream
Tssr91983	transcription start site region 91983	102 bp upstream