rs216832550 SNP Detail

Summary

• ID
  rs216832550
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78430543 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTCAAGGT GTACCATGAG
  AGAGATGAGA AAGCCCAAAA ACAAAAACAC TGCAAGCTGG CAAAGGCTGT CCGACCAGCT
  CTAGCTACTA CCCCGAACTC CTGGCCTTCT AAGGTTCAGG GACCACTAGC CCCTTGCTAT
  AGATGTGGTC AGCAAGGTCA TTGGGTGAGG TTTTGCCCTA CGCCCCACAA GCCAAGGGGA
  Y
  CGTGTCCTAA GTGCCGTCAG GAGGGACATT GGGCTGTCGA TAGCCCTCGT GTTGCACAGA
  ACAGAGGGAC ATCCGGTCCA GGTACTCCTC CAGCTGACCG CCTAGGCTTG GCTATGGGTG
  ACCTAAGGGG CCGGAGCTCC TTCGACCCAG CCACGCCCAT CACTAGCAGG GAGCCCAGGT
  AGCTATTATG GTGTTTGGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323016433	CHEV_9_78371068	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216832550					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78430543 () rs orientation: forward

Symbol	Name	Function Class
Gm47430	predicted gene, 47430	1104 bp downstream
Gm69163	predicted gene, 69163	1758 bp upstream
Rr206776	regulatory region 206776	1142 bp distal
Rr383643	regulatory region 383643	1182 bp upstream