rs216906562 SNP Detail

Summary

• ID
  rs216906562
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:39677113 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTAACTGA AAGGGAAAAA
  CTATAAAATG TAGACCTTGA GATGGGTCCA AGAGCTGGTA AACAATGTTC AGAGGGGAGA
  ACATACACAC ACACACACAC ACACACACAC ACACACTCCT AAAAGCACAT ATTTACTTTT
  AGTAGTCCAA GGCTACTAAA ACCTGGTTCA TTCACTCAGC AAATAATTAT TGATTATTTT
  Y
  CTGGAACTGT CCTGGCGACG AGGCCAAAAG GAAGCCCTGA AAACACCAGT GTGCACTGGG
  TGGGAAGGAA ACGAGACAGT AGCTTAGCTG AGCTTGTGCC TCTTACACAG CCTCTCTTGG
  ACCTTATGCT TTGGCCTGGT TTTAATGCTG AACACAAACC CTGCTTGCTC TGGCAAAGAG
  AACCTCTCAG GATTGGCTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324931219	CHEV_15_39645263	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216906562					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:39677113 () rs orientation: forward

Symbol	Name	Function Class
Dpys	dihydropyrimidinase	within coordinates
Gm16291	predicted gene 16291	1340 bp downstream
Gm62327	predicted gene, 62327	within coordinates
Rr302762	regulatory region 302762	688 bp proximal
Rr309646	regulatory region 309646	1805 bp distal