rs216958580 SNP Detail

Summary

• ID
  rs216958580
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:111273552 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTAAAAGCC ACTCTGGGAA
  GGTCTCAGCA GAAGAGGAAA ACAATAAAAA TGGTATCCAT GGAGATGTCC TCTGTTTCCA
  AGGAGCAACA ATGAACACAC CGCTACTTTG TTTCAATTTG AAACTTTTCT TGGGAAGAAC
  TGGCAACCTG CCTTCTGGAT TAAATTTATT CTACATTTAA AAAAAAATTA AAACCTTCCT
  R
  TCTTAGGGTT TTACTGCTGT GAACAGACAC CATGACCAAG GCAAGTCGTA TAAAAACATT
  TAATTGGGGC TAGCTTACAG GTTCAGAGGT TCAGTCCATT ATCATCAAGG TGGGAGCATA
  GCAGCATCCA GGCTGTCATG GCGCAGGCAG AGCTGAGAGT TCTACGTCTT CATCCAAAGG
  CTGCTAGTGG AAGACTGACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323473581	CHEV_10_110874747	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216958580					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:111273552 () rs orientation: forward

Symbol	Name	Function Class
Rr229875	regulatory region 229875	1739 bp proximal