rs216965161 SNP Detail

Summary

• ID
  rs216965161
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:55680204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AGGAAAGAA CCTTTCTCAA GAGCATCAGA
  GATCCTTAGG GAAGTGGTCA GGGGAGGCAC AGCCTCATAG CCACCAGGAA GCATGCTCTT
  TTCTTCCAGA CTTTGAGTGG GGAGATCAAG AGTATCAGAA GATCCAGTTG GAGGGACGAg
  Y
  gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt atgtgtgtag
  aggctgacac tgggtatctt tttctactac accttgtttg ttttgagaca aagtctcgtg
  ctgaatctgc taggcaataa gtgatagcga                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323676549	CHEV_11_55602880	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216965161					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:55680204 () rs orientation: forward

Symbol	Name	Function Class
D11Mit349	DNA Segment, Chr 11 Massachusetts Institute of Technology 349	within coordinates
Gm50502	predicted gene, 50502	within coordinates
Rr447615	regulatory region 447615	351 bp proximal
Rr447616	regulatory region 447616	474 bp proximal
Rr447617	regulatory region 447617	1405 bp proximal
Rr447618	regulatory region 447618	1937 bp proximal