rs216998921 SNP Detail

Summary

• ID
  rs216998921
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59788064 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATCCCGGAT GACAAGCTGC TCCCGCTCAG GGTACTGAGA
  GTCCTCCTCA GGCCTGGCCA ACAGGCCAGC TGGTAGCTGT GTGTGCTGAT CGAGTTTCTC
  G
  GCTCCTACCC GAGTGCCATC CGCCACCGCC TGCCCTTGGA TGGATGCCTG TTGGTGCTCC
  TCACCGACAG CCTGAATCTC ATTGGTTTCC TCTGCACAT                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324357472	CHEV_13_59741611	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs216998921					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59788064 () rs orientation: forward

Symbol	Name	Function Class
Golm1	golgi membrane protein 1	within coordinates
Rr481236	regulatory region 481236	509 bp distal
Tssr4093	transcription start site region 4093	13 bp upstream
Tssr122874	transcription start site region 122874	78 bp upstream
Tssr122875	transcription start site region 122875	61 bp upstream